Terminologies: ExperimentalApproach library

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/chemogenetics
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on using genetically encoded chemically sensitive proteins in combination with a specific agonist delivered systemically in order to manipulate the behavior of populations of cells.
name:: chemogenetics

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clinicalResearch

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/clinicalResearch
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on medical observation, treatment, or testing of patients.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739401
name:: clinical research
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Clinical

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computationalModeling

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/computationalModeling
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on creating or characterizing computational models or simulations of experimentally observed phenomena.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739414
name:: computational modeling
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/ComputationalModelling

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developmentalBiology

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@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/developmentalBiology
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on life cycle, development, or developmental history of an organism.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739412
name:: developmental biology
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Developmental

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ecology

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@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/ecology
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on interrelationship of organisms and their environments, including causes and consequences.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739389
name:: ecology
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Ecology

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electrophysiology

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/electrophysiology
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on electrical phenomena associated with living systems, most notably the nervous system, cardiac system, and musculoskeletal system.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0741202
name:: electrophysiology
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Electrophysiology

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epidemiology

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/epidemiology
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on incidence, distribution, and possible control of diseases and other factors relating to health.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739400
name:: epidemiology
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Epidemiology

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epigenomics

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/epigenomics
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on processes that modulate transcription but that do not directly alter the primary sequences of an organism’s DNA.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0741207
name:: epigenomics
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Epigenomics

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ethology

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/ethology
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on natural unmanipulated human or animal behavior and social organization from a biological, life history, and often evolutionary perspective.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739388
name:: ethology
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Ethology

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evolutionaryBiology

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@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/evolutionaryBiology
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on heritable characteristics of biological populations and their variation through the modification of developmental process to produce new forms and species.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739392
name:: evolutionary biology
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Evolution

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expression

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/expression
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on driving or detecting expression of genes in cells or tissues.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739397
name:: expression
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Expression

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expressionCharacterization

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/expressionCharacterization
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on the cellular, anatomical, or morphological distribution of gene expression.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739409
name:: expression characterization
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/ExpressionCharachterization

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genetics

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/genetics
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach that measures or manipulates some aspect of the genetic material of an organism.
name:: genetics

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genomics

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/genomics
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on structure, function, evolution, and mapping of genomes, the entiretiy of the genetic material of a single organism.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0741204
name:: genomics
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Genomics

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histology

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/histology
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on structure of biological tissue.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739399
name:: histology
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Histology

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informatics

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/informatics
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on collection, classification, storage, retrieval, analysis, visualization, and dissemination of recorded knowledge in computational systems.
name:: informatics

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metabolomics

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/metabolomics
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on chemical processes involving metabolites, the small molecule substrates, intermediates and products of cell metabolism.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0741203
name:: metabolomics
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Metabolomics

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microscopy

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/microscopy
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on using differential contrast of microscopic structures to form an image.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739404
name:: microscopy
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Microscopy

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morphology

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/morphology
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on the shape and structure of living organisms or their parts.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739403
name:: morphology
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Morphology

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multimodalResearch

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/multimodalResearch
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach that employs multiple experimental approaches in significant ways.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739395
name:: multimodal research
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Multimodal

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multiomics

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/multiomics
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach that employs multiple omics approaches in significant ways.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739407
name:: multiomics
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Multiomics

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neuralConnectivity

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/neuralConnectivity
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on functional or anatomical connections between single neurons or populations of neurons in defined anatomical regions.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739393
name:: neural connectivity
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Connectivity

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neuroimaging

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/neuroimaging
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on the non-invasive direct or indirect imaging of the structure, function, or pharmacology of the nervous system.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0741206
name:: neuroimaging
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Neuroimaging

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omics

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/omics
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on characterization and quantification of biological molecules that give rise to the structure, function, and dynamics of organisms or their parts.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739405
name:: omics
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Omics

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optogenetics

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/optogenetics
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on using genetically encoded light-sensitive proteins in combination with targeted delivery of light in order to manipulate the behavior of populations of cells.
name:: optogenetics

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pathology

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/pathology
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach that aims to identify or classify the causes and effects of diseases, disorders, injuries, or other abnormal biology.
name:: pathology

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pharmacology

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/pharmacology
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach in which the composition, properties, functions, sources, synthesis and design of drugs (any artificial, natural, or endogenous molecule) and their biochemical or physiological effect (normal or abnormal) on a cell, tissue, organ, or organism are studied. [adapted from [wikipedia](https://en.wikipedia.org/wiki/Pharmacology)]
interlexIdentifier:: http://uri.interlex.org/base/ilx_0108784
name:: pharmacology
preferredOntologyIdentifier:: http://edamontology.org/topic_0202

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physiology

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/physiology
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on normal functions of living organisms and their parts.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739410
name:: physiology
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Physiology

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proteomics

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/proteomics
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on the composition, structure, and activity of an entire set of proteins in organisms or their parts.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0741205
name:: proteomics
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Proteomics

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radiology

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/radiology
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on using non-invasive techniques that use intrinsic or induced contrast to form images. Also covers purely clinical domains such as nuclear medicine.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739390
name:: radiology
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Radiology

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spatialTranscriptomics

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/spatialTranscriptomics
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on mapping the spatial location of gene activity in biological tissue.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739396
name:: spatial transcriptomics
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/SpatialTranscriptomics

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transcriptomics

metadata sheet

@context:: @vocab: <https://openminds.ebrains.eu/vocab/>
@id:: https://openminds.ebrains.eu/instances/experimentalApproach/transcriptomics
@type:: https://openminds.ebrains.eu/controlledTerms/ExperimentalApproach
definition:: Any experimental approach focused on the transcriptome (all RNA transcripts) of one or more cells, tissues, or organisms.
interlexIdentifier:: http://uri.interlex.org/base/ilx_0739406
name:: transcriptomics
preferredOntologyIdentifier:: http://uri.interlex.org/tgbugs/uris/readable/modality/Transcriptomics

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