Terminologies: OrganismSystem library
Related schema specification: OrganismSystem
autonomicNervousSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/autonomicNervousSystem
- @type:
- definition:
Is an anatomical entity. Is part of the peripheral nervous system. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0002410) (‘is_a’ and ‘relationship’)]
- description:
The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0002410)]
- name:
autonomic nervous system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0002410#autonomic-nervous-system
- preferredOntologyIdentifier:
cardiovascularSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/cardiovascularSystem
- @type:
- definition:
‘The ‘cardiovascular system’ is an anatomical organ system where the heart pumps blood through blood vessels to and from all parts of the body.
- name:
cardiovascular system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0004535#cardiovascular-system
- preferredOntologyIdentifier:
centralNervousSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/centralNervousSystem
- @type:
- definition:
Is part of the nervous system. [auto-generated from ‘relationship’ property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0001017)]
- description:
The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0001017)]
- name:
central nervous system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0001017#central-nervous-system-1
- preferredOntologyIdentifier:
cholinergicSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/cholinergicSystem
- @type:
- definition:
The cholinergic system is composed of any molecule, protein, cell, tissue or organ that is related to acetylcholine.
- name:
cholinergic system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0025595#cholinergic-system-1
- preferredOntologyIdentifier:
http://purl.obolibrary.org/obo/UBERON_0002204http://purl.obolibrary.org/obo/UBERON_0025595
digestiveSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/digestiveSystem
- @type:
- definition:
The ‘digestive system’ is an anatomical organ system composed of organs devoted to the ingestion, digestion, the assimilation of food and the discharge of residual wastes.
- name:
digestive system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0001007#digestive-system
- preferredOntologyIdentifier:
entericNervousSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/entericNervousSystem
- @type:
- definition:
Is part of the autonomic nervous system. [auto-generated from ‘relationship’ property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0002005)]
- description:
The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0002005)]
- name:
enteric nervous system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0002005#enteric-nervous-system-1
- preferredOntologyIdentifier:
extrapyramidalTractSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/extrapyramidalTractSystem
- @type:
- definition:
Is a regional part of brain. Is part of the motor system. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0035803) (‘is_a’ and ‘relationship’)]
- description:
A neural network located in the brain that is part of the motor system involved in the coordination of movement that is distinct from the pyramidal tract. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0035803)]
- name:
extrapyramidal tract system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0035803#extrapyramidal-tract-system
- preferredOntologyIdentifier:
gabaergicSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/gabaergicSystem
- @type:
- definition:
The gabaergic system is composed of any molecule, protein, cell, tissue or organ that is related to GABA.
- name:
gabaergic system
- preferredCrossReference:
https://knowledge-space.org/wiki/NLXANAT:1005024#gabaergic-system
- preferredOntologyIdentifier:
glutamatergicSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/glutamatergicSystem
- @type:
- definition:
The glutamatergic system is composed of any molecule, protein, cell, tissue or organ that is related to glutamate (when in the role of a neurotransmitter).
- name:
glutamatergic system
- preferredOntologyIdentifier:
glymphaticSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/glymphaticSystem
- @type:
- definition:
Is an anatomical entity and anatomical system. Is part of the nervous system. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0036145) (‘is_a’ and ‘relationship’)]
- description:
Macroscopic waste clearance system that utilizes a unique system of perivascular tunnels, formed by astroglial cells, to promote efficient elimination of soluble proteins and metabolites from the central nervous system. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0036145)]
- name:
glymphatic system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0036145#glymphatic-system
- preferredOntologyIdentifier:
limbicSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/limbicSystem
- @type:
- definition:
Is part of the forebrain. [auto-generated from ‘relationship’ property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0000349)]
- description:
A set of midline structures surrounding the brainstem of the mammalian brain, originally described anatomically, e.g., hippocampal formation, amygdala, hypothalamus, cingulate cortex. Although the original designation was anatomical, the limbic system has come to be associated with the system in the brain subserving emotional functions. As such, it is very poorly defined and doesn’t correspond closely to the anatomical meaning any longer. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0000349)]
- name:
limbic system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0000349#limbic-system
- preferredOntologyIdentifier:
motorSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/motorSystem
- @type:
- definition:
Is a neural system. [auto-generated from ‘is_a’ property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0025525)]
- description:
The part of the central nervous system that is involved with movement. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0025525)]
- name:
motor system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0025525#motor-system
- preferredOntologyIdentifier:
musculoskeletalSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/musculoskeletalSystem
- @type:
- definition:
The ‘musculoskeletal system’ is an anatomical organ system composed of organs providing the body with movement, stability, shape and support.
- description:
The musculoskeletal system (sometimes also called locomotor system) is subdivided into two broader systems, the skeletal system and the muscular system. The skeletal system includes bones and joints. The muscular system includes all muscles in the body.
- name:
musculoskeletal system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0002204#musculoskeletal-system
- preferredOntologyIdentifier:
nervousSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/nervousSystem
- @type:
- definition:
Is an anatomical entity and anatomical system. [auto-generated from ‘is_a’ property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0001016)]
- description:
The nervous system is an organ system containing predominantly neuron and glial cells. In bilaterally symmetrical organism, it is arranged in a network of tree-like structures connected to a central body. The main functions of the nervous system are to regulate and control body functions, and to receive sensory input, process this information, and generate behavior. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0001016)]
- name:
nervous system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0001016#nervous-system-1
- preferredOntologyIdentifier:
neuralSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/neuralSystem
- @type:
- definition:
Is an anatomical entity. Is part of the nervous system. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0023879) (‘is_a’ and ‘relationship’)]
- description:
A set of neural structures that subserve a specific function, e.g., visual system. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0023879)]
- name:
neural system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0023879#neural-system-1
- preferredOntologyIdentifier:
noradrenergicSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/noradrenergicSystem
- @type:
- definition:
The noradrenergic system is composed of any molecule, protein, cell, tissue or organ that is related to norepinephrine (also known as noradrenaline).
- name:
noradrenergic system
- preferredCrossReference:
https://knowledge-space.org/wiki/NLXANAT:1005027#noradrenergic-system
- preferredOntologyIdentifier:
parasympatheticNervousSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/parasympatheticNervousSystem
- @type:
- definition:
Is part of the autonomic nervous system. [auto-generated from ‘relationship’ property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0000011)]
- description:
The parasympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0000011)]
- name:
parasympathetic nervous system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0000011#parasympathetic-nervous-system-1
- preferredOntologyIdentifier:
peripheralNervousSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/peripheralNervousSystem
- @type:
- definition:
Is an anatomical entity. Is part of the nervous system. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0000010) (‘is_a’ and ‘relationship’)]
- description:
A major division of the nervous system that contains nerves which connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0000010)]
- name:
peripheral nervous system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0000010#peripheral-nervous-system-1
- preferredOntologyIdentifier:
proprioceptiveSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/proprioceptiveSystem
- @type:
- definition:
Is a neural system. [auto-generated from ‘is_a’ property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0025533)]
- description:
The sensory system for the sense of proprioception. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0025533)]
- name:
proprioceptive system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0025533#proprioceptive-system
- preferredOntologyIdentifier:
sensorimotorSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/sensorimotorSystem
- @type:
- definition:
Is a neural system. [auto-generated from ‘is_a’ property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0025534)]
- name:
sensorimotor system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0025534#sensorimotor-system
- preferredOntologyIdentifier:
serotonergicSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/serotonergicSystem
- @type:
- definition:
The serotonergic system is composed of any molecule, protein, cell, tissue or organ that is related to serotonin.
- name:
serotonergic system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0025593#serotonergic-system-1
- preferredOntologyIdentifier:
somaticMotorSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/somaticMotorSystem
- @type:
- definition:
Is an anatomical entity. Is part of the somatic nervous system. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0003945) (‘is_a’ and ‘relationship’)]
- description:
The neural tissue involved in the transmission of motor signals. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0003945)]
- name:
somatic motor system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0003945#somatic-motor-system
- preferredOntologyIdentifier:
somaticNervousSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/somaticNervousSystem
- @type:
- definition:
Is an anatomical entity. Is part of the peripheral nervous system. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0000012) (‘is_a’ and ‘relationship’)]
- description:
Part of peripheral nervous system that includes the somatic parts of the cranial and spinal nerves and their ganglia and the peripheral sensory receptors. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0000012)]
- name:
somatic nervous system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0000012#somatic-nervous-system
- preferredOntologyIdentifier:
somaticSensorySystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/somaticSensorySystem
- @type:
- definition:
Is part of the somatic nervous system. [auto-generated from ‘relationship’ property of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0003942)]
- description:
The sensory system for the sense of touch and pain. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0003942)]
- name:
somatic sensory system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0003942#somatosensory-system
- preferredOntologyIdentifier:
sympatheticNervousSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/sympatheticNervousSystem
- @type:
- definition:
Is an anatomical entity. Is part of the autonomic nervous system. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0000013) (‘is_a’ and ‘relationship’)]
- description:
The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0000013)]
- name:
sympathetic nervous system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0000013#sympathetic-nervous-system-1
- preferredOntologyIdentifier:
vascularSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/vascularSystem
- @type:
- definition:
The ‘vascular system’ is an anatomical system that consists of all vessels in the body, and carries blood and lymph through all parts of the body.
- name:
vascular system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0007798#vascular-system
- preferredOntologyIdentifier:
ventricularSystemOfBrain
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/ventricularSystemOfBrain
- @type:
- definition:
Is an anatomical system. Is part of the brain and the ventricular system of central nervous system. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0005282) (‘is_a’ and ‘relationship’)]
- name:
ventricular system of brain
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0005282#ventricular-system-of-brain
- preferredOntologyIdentifier:
ventricularSystemOfCentralNervousSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/ventricularSystemOfCentralNervousSystem
- @type:
- definition:
Is an anatomical system. Is part of the central nervous system. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0005281) (‘is_a’ and ‘relationship’)]
- description:
A set of structures containing cerebrospinal fluid in the brain. It is continuous with the central canal of the spinal cord. [definition of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0005281)]
- name:
ventricular system of central nervous system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0005281#ventricular-system-of-central-nervous-system
- preferredOntologyIdentifier:
visualProcessingPartOfNervousSystem
metadata sheet
- @context:
@vocab: <https://openminds.om-i.org/props/>
- @id:
https://openminds.om-i.org/instances/organismSystem/visualProcessingPartOfNervousSystem
- @type:
- definition:
Is an anatomical entity. Is part of the nervous system. [auto-generated from properties of the [UBERON ontology term](http://purl.obolibrary.org/obo/UBERON_0006794) (‘is_a’ and ‘relationship’)]
- name:
visual processing part of nervous system
- preferredCrossReference:
https://knowledge-space.org/wiki/UBERON:0006794#visual-processing-part-of-nervous-system
- preferredOntologyIdentifier: