########################################### Terminologies: ExperimentalApproach library ########################################### Related schema specification: `ExperimentalApproach `_ ------------ ------------ anatomy ------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/anatomy :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on the bodily structure of living organisms. :name: anatomy :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739411 `BACK TO TOP `_ ------------ behavior -------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/behavior :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on the mechanical activity or cognitive processes underlying mechanical activity of living organisms often in response to external sensory stimuli. :name: behavior :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739413 `BACK TO TOP `_ ------------ biophysics ---------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/biophysics :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach that is traditionally used in physics, but applied and modified to study biological phenomena. [adapted from [wikipedia](https://en.wikipedia.org/wiki/Biophysics)] :name: biophysics :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0793772 `BACK TO TOP `_ ------------ cellBiology ----------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/cellBiology :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on structure, function, multiplication, pathology, and life history of biological cells. :name: cell biology :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739391 `BACK TO TOP `_ ------------ cellMorphology -------------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/cellMorphology :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on the shape and structure of individual cells. :name: cell morphology :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739394 `BACK TO TOP `_ ------------ cellPopulationCharacterization ------------------------------ .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/cellPopulationCharacterization :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on biochemical, molecular and/or physiological characteristics of populations of cells as opposed to individual cells. :name: cell population characterization :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739408 `BACK TO TOP `_ ------------ cellPopulationImaging --------------------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/cellPopulationImaging :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on imaging biochemical, molecular, or physiological characteristics of populations of cells. :name: cell population imaging :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739402 `BACK TO TOP `_ ------------ cellPopulationManipulation -------------------------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/cellPopulationManipulation :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on manipulation of biochemical, molecular, or physiological characteristics of populations of cells. :name: cell population manipulation :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739398 `BACK TO TOP `_ ------------ chemogenetics ------------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/chemogenetics :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on using genetically encoded chemically sensitive proteins in combination with a specific agonist delivered systemically in order to manipulate the behavior of populations of cells. :name: chemogenetics `BACK TO TOP `_ ------------ clinicalResearch ---------------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/clinicalResearch :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on medical observation, treatment, or testing of patients. :name: clinical research :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739401 `BACK TO TOP `_ ------------ computationalModeling --------------------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/computationalModeling :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on creating or characterizing computational models or simulations of experimentally observed phenomena. :name: computational modeling :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739414 `BACK TO TOP `_ ------------ developmentalBiology -------------------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/developmentalBiology :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on life cycle, development, or developmental history of an organism. :name: developmental biology :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739412 `BACK TO TOP `_ ------------ ecology ------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/ecology :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on interrelationship of organisms and their environments, including causes and consequences. :name: ecology :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739389 `BACK TO TOP `_ ------------ electrophysiology ----------------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/electrophysiology :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on electrical phenomena associated with living systems, most notably the nervous system, cardiac system, and musculoskeletal system. :name: electrophysiology :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0741202 `BACK TO TOP `_ ------------ epidemiology ------------ .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/epidemiology :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on incidence, distribution, and possible control of diseases and other factors relating to health. :name: epidemiology :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739400 `BACK TO TOP `_ ------------ epigenomics ----------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/epigenomics :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on processes that modulate transcription but that do not directly alter the primary sequences of an organism's DNA. :name: epigenomics :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0741207 `BACK TO TOP `_ ------------ ethology -------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/ethology :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on natural unmanipulated human or animal behavior and social organization from a biological, life history, and often evolutionary perspective. :name: ethology :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739388 `BACK TO TOP `_ ------------ evolutionaryBiology ------------------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/evolutionaryBiology :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on heritable characteristics of biological populations and their variation through the modification of developmental process to produce new forms and species. :name: evolutionary biology :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739392 `BACK TO TOP `_ ------------ expression ---------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/expression :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on driving or detecting expression of genes in cells or tissues. :name: expression :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739397 `BACK TO TOP `_ ------------ expressionCharacterization -------------------------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/expressionCharacterization :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on the cellular, anatomical, or morphological distribution of gene expression. :name: expression characterization :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739409 `BACK TO TOP `_ ------------ genetics -------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/genetics :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach that measures or manipulates some aspect of the genetic material of an organism. :name: genetics `BACK TO TOP `_ ------------ genomics -------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/genomics :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on structure, function, evolution, and mapping of genomes, the entiretiy of the genetic material of a single organism. :name: genomics :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0741204 `BACK TO TOP `_ ------------ histology --------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/histology :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on structure of biological tissue. :name: histology :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739399 `BACK TO TOP `_ ------------ informatics ----------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/informatics :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on collection, classification, storage, retrieval, analysis, visualization, and dissemination of recorded knowledge in computational systems. :name: informatics `BACK TO TOP `_ ------------ metabolomics ------------ .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/metabolomics :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on chemical processes involving metabolites, the small molecule substrates, intermediates and products of cell metabolism. :name: metabolomics :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0741203 `BACK TO TOP `_ ------------ microscopy ---------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/microscopy :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on using differential contrast of microscopic structures to form an image. :name: microscopy :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739404 `BACK TO TOP `_ ------------ morphology ---------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/morphology :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on the shape and structure of living organisms or their parts. :name: morphology :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739403 `BACK TO TOP `_ ------------ multimodalResearch ------------------ .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/multimodalResearch :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach that employs multiple experimental approaches in significant ways. :name: multimodal research :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739395 `BACK TO TOP `_ ------------ multiomics ---------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/multiomics :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach that employs multiple omics approaches in significant ways. :name: multiomics :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739407 `BACK TO TOP `_ ------------ neuralConnectivity ------------------ .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/neuralConnectivity :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on functional or anatomical connections between single neurons or populations of neurons in defined anatomical regions. :name: neural connectivity :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739393 `BACK TO TOP `_ ------------ neuroimaging ------------ .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/neuroimaging :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on the non-invasive direct or indirect imaging of the structure, function, or pharmacology of the nervous system. :name: neuroimaging :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0741206 `BACK TO TOP `_ ------------ omics ----- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/omics :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on characterization and quantification of biological molecules that give rise to the structure, function, and dynamics of organisms or their parts. :name: omics :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739405 `BACK TO TOP `_ ------------ optogenetics ------------ .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/optogenetics :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on using genetically encoded light-sensitive proteins in combination with targeted delivery of light in order to manipulate the behavior of populations of cells. :name: optogenetics `BACK TO TOP `_ ------------ pathology --------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/pathology :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach that aims to identify or classify the causes and effects of diseases, disorders, injuries, or other abnormal biology. :name: pathology `BACK TO TOP `_ ------------ pharmacology ------------ .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/pharmacology :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach in which the composition, properties, functions, sources, synthesis and design of drugs (any artificial, natural, or endogenous molecule) and their biochemical or physiological effect (normal or abnormal) on a cell, tissue, organ, or organism are studied. [adapted from [wikipedia](https://en.wikipedia.org/wiki/Pharmacology)] :name: pharmacology :preferredOntologyIdentifier: http://edamontology.org/topic_0202 `BACK TO TOP `_ ------------ physiology ---------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/physiology :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on normal functions of living organisms and their parts. :name: physiology :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739410 `BACK TO TOP `_ ------------ proteomics ---------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/proteomics :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on the composition, structure, and activity of an entire set of proteins in organisms or their parts. :name: proteomics :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0741205 `BACK TO TOP `_ ------------ radiology --------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/radiology :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on using non-invasive techniques that use intrinsic or induced contrast to form images. Also covers purely clinical domains such as nuclear medicine. :name: radiology :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739390 `BACK TO TOP `_ ------------ spatialTranscriptomics ---------------------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/spatialTranscriptomics :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on mapping the spatial location of gene activity in biological tissue. :name: spatial transcriptomics :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739396 `BACK TO TOP `_ ------------ transcriptomics --------------- .. admonition:: metadata sheet :@context: @vocab: :@id: https://openminds.om-i.org/instances/experimentalApproach/transcriptomics :@type: https://openminds.om-i.org/types/ExperimentalApproach :definition: Any experimental approach focused on the transcriptome (all RNA transcripts) of one or more cells, tissues, or organisms. :name: transcriptomics :preferredOntologyIdentifier: http://uri.interlex.org/base/ilx_0739406 `BACK TO TOP `_ ------------